Software
SEB3R Pipeline
- University of Trento
DOI: 10.12751/g-node.971c6r BROWSE REPOSITORY BROWSE ARCHIVE DOWNLOAD ARCHIVE (ZIP 329 MiB)
Published 10 Aug. 2023 | License Creative Commons CC0 1.0 Public Domain Dedication
Description
A MATLAB pipeline for parcellation of freely-moving mouse behaviour. The tool runs starting from DeepLabCut-3d output files and identifies ethologically-relevant body postures.
Keywords
| Neuroscience | Murine behaviour | Neuroethology | Machine Learning |References
- Chelini G., Trombetta E. M., Fortunato-Asquini T., Ollari O., Pecchia T., Bozzi Y. (2023) "Automated Segmentation of the Mouse Body Language to Study Stimulus-Evoked Emotional Behaviors", bioRxiv https://doi.org/10.1101/2022.11.27.518077
- Chelini G., Trombetta E. M., Fortunato-Asquini T., Ollari O., Pecchia T., Bozzi Y. (in press) "Automated Segmentation of the Mouse Body Language to Study Stimulus-Evoked Emotional Behaviors", eNeuro
- Chelini G., Trombetta E. M. (2023) SEB3R Validation Data. G-Node. https://doi.org/10.12751/g-node.jmy711 https://doi.org/10.12751/g-node.jmy711
Funding
- CARITRO postdoctoral fellowship
- EU EU.63,000