Dataset

Automated detection and localization of synaptic vesicles in electron microscopy images

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  1. 1German Center for Neurodegenerative Diseases (DZNE) and NeuroCure Cluster of Excellence, Charitéplatz 1, 10117 Berlin, Germany
  2. 2Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, and Berlin Institute of Health, and NeuroCure Cluster of Excellence, Charitéplatz 1, 10117 Berlin, Germany; 1German Center for Neurodegenerative Diseases (DZNE) Berlin, 10117 Berlin, Germany; Bernstein Center for Computational Neuroscience (BCCN) Berlin, 10115 Berlin, Germany; Einstein Center for Neurosciences (ECN) Berlin, 10117 Berlin, Germany; Max-Delbrück-Centrum (MDC) for molecular medicine, 13125 Berlin, Germany
  3. 3Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, and Berlin Institute of Health, and NeuroCure Cluster of Excellence, Charitéplatz 1, 10117 Berlin, Germany

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Published 30 Oct. 2021 | License Creative Commons CC0 4.0 Attribution International


Description

This repository conitains 87 electron microscopy images of hippocampal murine presynaptic terminals that have been used to train, test and evaluate the performance of an algorithm for the automated detection and analysis of synaptic vesicles.

Keywords

| Neuroscience | Synapses | Synaptic vesicles | convolutional neural network |

References

  • Imbrosci B, Schmitz D, Orlando M. Automated detection and localization of synaptic vesicles in electron microscopy images. To date, October 2021, is under revision at eNeuro

Funding

  • DFG DFG.Exc2049

Citation

Imbrosci B, Schmitz D, Orlando M (2021) Automated detection and localization of synaptic vesicles in electron microscopy images. G-Node. https://doi.org/10.12751/g-node.s4bsnu